尽管变压器语言模型(LMS)是信息提取的最新技术,但长文本引入了需要次优的预处理步骤或替代模型体系结构的计算挑战。稀疏注意的LMS可以代表更长的序列,克服性能障碍。但是,目前尚不清楚如何解释这些模型的预测,因为并非所有令牌都在自我发项层中相互参加,而在运行时,长序列对可解释性算法提出了计算挑战,而当运行时取决于文档长度。这些挑战在文档可能很长的医学环境中是严重的,机器学习(ML)模型必须是审核和值得信赖的。我们介绍了一种新颖的蒙版抽样程序(MSP),以识别有助于预测的文本块,将MSP应用于预测医学文本诊断的背景下,并通过两位临床医生的盲目审查来验证我们的方法。我们的方法比以前的最先进的临床信息块高约1.7倍,速度更快100倍,并且可用于生成重要的短语对。 MSP特别适合长LMS,但可以应用于任何文本分类器。我们提供了MSP的一般实施。
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Dense prediction tasks such as segmentation and detection of pathological entities hold crucial clinical value in the digital pathology workflow. However, obtaining dense annotations on large cohorts is usually tedious and expensive. Contrastive learning (CL) is thus often employed to leverage large volumes of unlabeled data to pre-train the backbone network. To boost CL for dense prediction, some studies have proposed variations of dense matching objectives in pre-training. However, our analysis shows that employing existing dense matching strategies on histopathology images enforces invariance among incorrect pairs of dense features and, thus, is imprecise. To address this, we propose a precise location-based matching mechanism that utilizes the overlapping information between geometric transformations to precisely match regions in two augmentations. Extensive experiments on two pretraining datasets (TCGA-BRCA, NCT-CRC-HE) and three downstream datasets (GlaS, CRAG, BCSS) highlight the superiority of our method in semantic and instance segmentation tasks. Our method outperforms previous dense matching methods by up to 7.2 % in average precision for detection and 5.6 % in average precision for instance segmentation tasks. Additionally, by using our matching mechanism in the three popular contrastive learning frameworks, MoCo-v2, VICRegL and ConCL, the average precision in detection is improved by 0.7 % to 5.2 % and the average precision in segmentation is improved by 0.7 % to 4.0 %, demonstrating its generalizability.
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The proliferation of automatic faithfulness metrics for summarization has produced a need for benchmarks to evaluate them. While existing benchmarks measure the correlation with human judgements of faithfulness on model-generated summaries, they are insufficient for diagnosing whether metrics are: 1) consistent, i.e., decrease as errors are introduced into a summary, 2) effective on human-written texts, and 3) sensitive to different error types (as summaries can contain multiple errors). To address these needs, we present a benchmark of unfaithful minimal pairs (BUMP), a dataset of 889 human-written, minimally different summary pairs, where a single error (from an ontology of 7 types) is introduced to a summary from the CNN/DailyMail dataset to produce an unfaithful summary. We find BUMP complements existing benchmarks in a number of ways: 1) the summaries in BUMP are harder to discriminate and less probable under SOTA summarization models, 2) BUMP enables measuring the consistency of metrics, and reveals that the most discriminative metrics tend not to be the most consistent, 3) BUMP enables the measurement of metrics' performance on individual error types and highlights areas of weakness for future work.
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Recent advances in safety-critical risk-aware control are predicated on apriori knowledge of the disturbances a system might face. This paper proposes a method to efficiently learn these disturbances online, in a risk-aware context. First, we introduce the concept of a Surface-at-Risk, a risk measure for stochastic processes that extends Value-at-Risk -- a commonly utilized risk measure in the risk-aware controls community. Second, we model the norm of the state discrepancy between the model and the true system evolution as a scalar-valued stochastic process and determine an upper bound to its Surface-at-Risk via Gaussian Process Regression. Third, we provide theoretical results on the accuracy of our fitted surface subject to mild assumptions that are verifiable with respect to the data sets collected during system operation. Finally, we experimentally verify our procedure by augmenting a drone's controller and highlight performance increases achieved via our risk-aware approach after collecting less than a minute of operating data.
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Importance: Social determinants of health (SDOH) are known to be associated with increased risk of suicidal behaviors, but few studies utilized SDOH from unstructured electronic health record (EHR) notes. Objective: To investigate associations between suicide and recent SDOH, identified using structured and unstructured data. Design: Nested case-control study. Setting: EHR data from the US Veterans Health Administration (VHA). Participants: 6,122,785 Veterans who received care in the US VHA between October 1, 2010, and September 30, 2015. Exposures: Occurrence of SDOH over a maximum span of two years compared with no occurrence of SDOH. Main Outcomes and Measures: Cases of suicide deaths were matched with 4 controls on birth year, cohort entry date, sex, and duration of follow-up. We developed an NLP system to extract SDOH from unstructured notes. Structured data, NLP on unstructured data, and combining them yielded seven, eight and nine SDOH respectively. Adjusted odds ratios (aORs) and 95% confidence intervals (CIs) were estimated using conditional logistic regression. Results: In our cohort, 8,821 Veterans committed suicide during 23,725,382 person-years of follow-up (incidence rate 37.18 /100,000 person-years). Our cohort was mostly male (92.23%) and white (76.99%). Across the six common SDOH as covariates, NLP-extracted SDOH, on average, covered 84.38% of all SDOH occurrences. All SDOH, measured by structured data and NLP, were significantly associated with increased risk of suicide. The SDOH with the largest effects was legal problems (aOR=2.67, 95% CI=2.46-2.89), followed by violence (aOR=2.26, 95% CI=2.11-2.43). NLP-extracted and structured SDOH were also associated with suicide. Conclusions and Relevance: NLP-extracted SDOH were always significantly associated with increased risk of suicide among Veterans, suggesting the potential of NLP in public health studies.
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Fires have destructive power when they break out and affect their surroundings on a devastatingly large scale. The best way to minimize their damage is to detect the fire as quickly as possible before it has a chance to grow. Accordingly, this work looks into the potential of AI to detect and recognize fires and reduce detection time using object detection on an image stream. Object detection has made giant leaps in speed and accuracy over the last six years, making real-time detection feasible. To our end, we collected and labeled appropriate data from several public sources, which have been used to train and evaluate several models based on the popular YOLOv4 object detector. Our focus, driven by a collaborating industrial partner, is to implement our system in an industrial warehouse setting, which is characterized by high ceilings. A drawback of traditional smoke detectors in this setup is that the smoke has to rise to a sufficient height. The AI models brought forward in this research managed to outperform these detectors by a significant amount of time, providing precious anticipation that could help to minimize the effects of fires further.
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We present a method for controlling a swarm using its spectral decomposition -- that is, by describing the set of trajectories of a swarm in terms of a spatial distribution throughout the operational domain -- guaranteeing scale invariance with respect to the number of agents both for computation and for the operator tasked with controlling the swarm. We use ergodic control, decentralized across the network, for implementation. In the DARPA OFFSET program field setting, we test this interface design for the operator using the STOMP interface -- the same interface used by Raytheon BBN throughout the duration of the OFFSET program. In these tests, we demonstrate that our approach is scale-invariant -- the user specification does not depend on the number of agents; it is persistent -- the specification remains active until the user specifies a new command; and it is real-time -- the user can interact with and interrupt the swarm at any time. Moreover, we show that the spectral/ergodic specification of swarm behavior degrades gracefully as the number of agents goes down, enabling the operator to maintain the same approach as agents become disabled or are added to the network. We demonstrate the scale-invariance and dynamic response of our system in a field relevant simulator on a variety of tactical scenarios with up to 50 agents. We also demonstrate the dynamic response of our system in the field with a smaller team of agents. Lastly, we make the code for our system available.
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Objective: Evictions are involved in a cascade of negative events that can lead to unemployment, homelessness, long-term poverty, and mental health problems. In this study, we developed a natural language processing system to automatically detect eviction incidences and their attributes from electronic health record (EHR) notes. Materials and Methods: We annotated eviction status in 5000 EHR notes from the Veterans Health Administration. We developed a novel model, called Knowledge Injection based on Ripple Effects of Social and Behavioral Determinants of Health (KIRESH), that has shown to substantially outperform other state-of-the-art models such as fine-tuning pre-trained language models like BioBERT and Bio_ClinicalBERT. Moreover, we designed a prompt to further improve the model performance by using the intrinsic connection between the two sub-tasks of eviction presence and period prediction. Finally, we used the Temperature Scaling-based Calibration on our KIRESH-Prompt method to avoid over-confidence issues arising from the imbalance dataset. Results: KIRESH-Prompt achieved a Macro-F1 of 0.6273 (presence) and 0.7115 (period), which was significantly higher than 0.5382 (presence) and 0.67167 (period) for just fine-tuning Bio_ClinicalBERT model. Conclusion and Future Work: KIRESH-Prompt has substantially improved eviction status classification. In future work, we will evaluate the generalizability of the model framework to other applications.
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With increasing number of crowdsourced private automatic weather stations (called TPAWS) established to fill the gap of official network and obtain local weather information for various purposes, the data quality is a major concern in promoting their usage. Proper quality control and assessment are necessary to reach mutual agreement on the TPAWS observations. To derive near real-time assessment for operational system, we propose a simple, scalable and interpretable framework based on AI/Stats/ML models. The framework constructs separate models for individual data from official sources and then provides the final assessment by fusing the individual models. The performance of our proposed framework is evaluated by synthetic data and demonstrated by applying it to a re-al TPAWS network.
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We apply Physics Informed Neural Networks (PINNs) to the problem of wildfire fire-front modelling. The PINN is an approach that integrates a differential equation into the optimisation loss function of a neural network to guide the neural network to learn the physics of a problem. We apply the PINN to the level-set equation, which is a Hamilton-Jacobi partial differential equation that models a fire-front with the zero-level set. This results in a PINN that simulates a fire-front as it propagates through a spatio-temporal domain. We demonstrate the agility of the PINN to learn physical properties of a fire under extreme changes in external conditions (such as wind) and show that this approach encourages continuity of the PINN's solution across time. Furthermore, we demonstrate how data assimilation and uncertainty quantification can be incorporated into the PINN in the wildfire context. This is significant contribution to wildfire modelling as the level-set method -- which is a standard solver to the level-set equation -- does not naturally provide this capability.
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